Education

 2022-2023 Schedule Optional Master “Biomedical Proteomics" ; M_CPROTBI09
Theme 1 Proteomics, Mass Spectrometry and Biomedical Applications Coordinator: CR Jiménez
Week/day/date duration Staff Form Subject Room
  Please note that breaks will be made flexibly as needed
1 Mon 30-Jan 9.30-10.30 CRJ L Introduction to Proteomics CCA 1.06
1 Mon 30-Jan 10.30-11.30 CRJ L Proteomics to obtain biological insight, part 1 CCA 1.06
1 Mon 30-Jan 11.30-12.30 CRJ L Proteomics to obtain biological insight, part 2 CCA 1.06
1 Mon 30-Jan 12.30-17.00 n/a Zelfstudie Literature reading n/a
1 Tue 31-Jan 9.30-10.00 CRJ Q&A Short discussion learning goals and self-study Monday  CCA 1.06
1 Tue 31-Jan 10.00-11.00 CRJ L Mass spectrometry in Proteomics, part 1 CCA 1.06
1 Tue 31-Jan 11.00-12.00 CRJ L Mass spectrometry in Proteomics, part 2 CCA 1.06
1 Tue 31-Jan 12.00-12.30 TVP L/ Demo Protein identification by Database searching CCA 1.06
1 Tue 31-Jan 12.30-17.00 n/a Zelfstudie Literature reading n/a
1 Wedn 1-Feb 9.30-10.00 CRJ Q&A Short discussion learning goals and self-study Tuesday  CCA 1.06
1 Wedn 1-Feb 10.00-11.00 CRJ L Quantitative proteomics CCA 1.06
1 Wedn 1-Feb 11.00-12.00 CRJ L Biomarker Discovery CCA 1.06
1 Wedn 1-Feb 12.30-17.00 n/a Zelfstudie Literature reading n/a
1 Thu 2-Feb 9.30-10.00 CRJ Q&A Short discussion learning goals and self-study Wednessday  CCA 1.06
1 Thu 2-Feb 10.00-11.00 CRJ L Proteomics to study cellular signaling: Analysis of protein complexes CCA 1.06
1 Thu 2-Feb 11.00-12.00 CRJ L Proteomics to study cellular signaling: Phosphoproteomics CCA 1.06
1 Thu 2-Feb 12.00-13.00 DK L Proteomics in cardiovascular disease tbd
1 Fri 3-Feb 9.30-10.00 CRJ Q&A Short discussion learning goals and self-study Thursday  CCA 1.06
1 Fri 3-Feb 10:00-10:30 IB L Protocol gelelectrophoresis & protein staining CCA 1.06
1 Fri 3-Feb 10:30-17:00 RH/IB PR Practicum gelelectrophoresis & protein staining f CCA 1.59
               
2022-2023 Scedule Optional Master “Biomedical Proteomics" ; M_CPROTBI09
Theme 2 Proteomics in Practice Coordinator: CR Jiménez
Global quantitative proteomics
Week/day/date duration Staff Form Subject Room
2 Mon 6-Feb 9.30-17.00 IB/RdH, OPL PR In-gel digestion of proteins  CCA 1.59 lab
2 Tue 7-Feb 9.00-13.00 IB/RdH PR Peptide extraction and sample preparation for mass spectrometry  CCA 1.59 lab
2 Tue 7-Feb 13.00-14.00 CRJ Tour of MS Lab LC-MS of peptide samples CCA mass spec lab
2 Tue 7-Feb 14.00-15.00 TVP L Data processing and data mining CCA 1.06
2 Tue 7-Feb 15.00-17.00 n/a Zelfstudie Literature reading, preparation presentation n/a
2 Wed 8-Feb 9.00-12.30 n/a Zelfstudie Literature reading, preparation presentation n/a
2 Wed 8-Feb 13.30-17.00 CRJ/ IB PR Literature study: presentation CCA 1.06
2 Thu 9-Feb 9.30-10.30 FB L Data mining using GO and pathway tools CCA 1.06
2 Thu 9-Feb 11.00-14.30 FB, CRJ PR Data mining t.b.a.
2 Thu 9-Feb 14.30-15.00 CRJ Q&A Discussion of last questions that may arise prior to the exam t.b.a.
2 Thu 9-Feb 15.00-17.00 n/a Zelfstudie Literature reading, preparation exam n/a
2 Fri 10-Feb 9.00-14.00 n/a Zelfstudie Preparation exam n/a
2 Fri 10-Feb 14.30-16.30 CRJ EXAM   CCA 3.38
               
L=lecture (hoorcollege); PR=  practical lab work      
               
staff:               
CRJ=  Connie Jiménez          
TVP=  Thang Pham          
RdH=  Richard de Haas          
DK=  Diederik Kuster          
FB= Franziska Bottger          
IB= Irene Bijnsdorp          
Proteomics= 3 credits cursus